发表文章（#共同第一；*通讯或共同通讯）

1           Zhang LL, Zhang X, Wang XJ, Xu J, Wang M, Li L, Bai GH, Fang H, Hu ST, Li JG, Yan JB, Li JS, Yang XH*. 2019 SEED CAROTENOID DEFICIENT Functions in the plastid MEP pathway to produce isoprenoids in maize. Plant Physiol, 179: 1723–1738

2           Xu J, Fu XY, Cai Y, Wang M, Xu ST, Li JS, Yang XH*. 2019 Uncovering the genetic basis of carotenoid variations in maize kernels using two segregating populations. Mol Breeding, 39:78

3           Li K, Wen WW, Alseekh S, Yang XH, Guo H, Li WQ, Wang LX, Pan QC, Zhan W, Liu J, Li YH, Wu X, Brotman Y, Willmitzer L, Li JS*, Fernie AR*, Yan JB*. 2019 Large-scale metabolite QTL analysis provides new insights for high-quality maize improvement. Plant J, 99(2):216-230

4           付俢义，殷鹏飞，季生辉，嘉博森，许静，杨小红*. 2019 利用转录组测序鉴定玉米白色籽粒突变基因PDS. 中国农业大学学报, 24(7): 1-9

 

5           Li WY, Yang ZX, Yao JY, Li JS, Song WB*, Yang XH*. 2018 Cellulose synthase-like D1 controls organ size in maize. BMC Plant Biology, 18:239

6           Chen QY, Han YJ, Liu HJ, Wang XF, Sun JM, Zhao BH, Li WY, Tian JG, Liang YM, Yan JB, Yang XH*, Tian F*. 2018 Genome-wide association analyses reveal the importance of alternative splicing in diversifying gene function and regulating phenotypic variation in maize. Plant Cell, 30:1404-1423.

7           Zhang RY, Xu G, Li JS, Yan JB, Li HH*, Yang XH*. 2018 Patterns of genomic variation in Chinese maize inbred lines and implications for genetic improvement. Theor Appl Genet, 131:1207-1211

8           Wang H, Xu ST, Fan YM, Liu NN, Zhan W, Liu HJ, Xiao YJ, Li K, Pan QC, Li WQ, Deng M, Liu J, Jin M, Yang XH, Li JS, Li Q, Yan JB. 2018 Beyond pathways: genetic dissection of tocopherol content in maize kernels by combining linkage and association analyses. Plant Biotechnol J, 16(8):1464-1475

9           Huang C, Sun HY, Xu DY, Chen QY, Liang YM, Wang XF, Xu GH, Tian JG, Wang CL, Li D, Wu LS, Yang XH, Jin WW, Doebley JF, Tian F. 2018 ZmCCT9 enhances maize adaptation to higher latitudes. Proc Natl Acad Sci USA, 115(2):E334-E341

10       Hao YF, Wang HW, Yang XH, Zhang HW, He C, Li DD, Li HH, Wang GY, Wang JH, Fu JJ. 2018 Genomic prediction using existing historical data contributing to selection in biparental populations: a study of kernel oil in maize. Plant Genome, 12:180025

11       Ma HL, Li GL, Tobias Würschum, Zhang Y, Zheng DB, Yang XH, Li JS, Liu WX, Yan JB, Chen SJ. 2018 Genome-wide association study of haploid male fertility in maize (Zea Mays L.). Frontiers in Plant Science, 9: 974

 

12       Han YJ, Xu G, Du HW, Hu JY, Liu ZJ, Li H, Li JS, Yang XH*. 2017 Natural variations in stearoyl-acp desaturase genes affect the conversion of stearic to oleic acid in maize kernel. Theor Appl Genet, 130:151-161

13       Yang N, Xu XW, Wang RR, Peng WL, Cai LC, Song JM, Li WQ, Luo X, Niu LY, Wang YB, Jin M, Chen L, Luo JY, Deng M, Wang L, Pan QC, Liu F, Jackson D, Yang XH, Chen LL, Yan JB. 2017 Contributions of Zea mays subspecies Mexicana haplotypes to modern maize. Nat Commun, 8: 1874

14       Li YP, Tong LX, Deng LL, Liu QY, Xing YX, Wang C, Liu BS, Yang XH, Xu ML. 2017 Evaluation of ZmCCT haplotypes for genetic improvement of maize hybrids. Theor Appl Genet, 130:2587–2600

15       Ma CY, Ma XN, Yao LS , Liu YJ, Du FL, Yang XH, Xu ML. 2017 qRfg3, a novel quantitative resistance locus against Gibberella stalk rot in maize. Theor Appl Genet, 130: 1723–1734

16       Xu DY, Wang XF, Huang C, Xu GH, Liang YM, Chen QY, Wang CL, Li D, Tian JG, Wu LS, Wu YY, Guo L, Wang XH, Wu WH, Zhang WQ, Yang XH, Tian F. 2017 Glossy15 plays an important role in the divergence of the vegetative transition between maize and its progenitor, teosinte. Mol Plant, 10: 1579–1583

17       Xu GH, Wang XF, Huang C, Xu DY, Li D, Tian JG, Chen QY, Wang CL, Liang YM, Wu YY, Yang XH, Tian F. 2017 Complex genetic architecture underlies maize tassel domestication. New Phytol, 214: 852-864

18       Liu J, Huang J, Guo H, Lan L, Wang HZ, Xu YC, Yang XH, Li WQ, Tong H, Xiao YJ, Pan QC, Qiao F, Raihan MS, Liu HJ, Zhang XH, Yang N, Wang XQ, Deng M, Jin ML, Zhao LJ, Luo X, Zhou Y, Li X, Zhan W, Liu NN, Wang H, Chen GS, Li Q, Yan JB. The Conserved and Unique Genetic Architecture of Kernel Size and Weight in Maize and Rice. Plant Physiol, 175: 774–785

19       He C, Fu JJ, Zhang J, Li YX, Zheng J, Zhang HW, Yang XH, Wang JH, Wang GY. 2017 A gene-oriented haplotype comparison reveals recently selected genomic regions in temperate and tropical maize germplasm. PLoS One, 12(1): e0169806

 

20       Cui ZH, Luo JH, Qi CY, Ruan YY, Li J, Zhang A, Yang XH*, He Y*. 2016 Genome-wide association study (GWAS) reveals the genetic architecture of four husk traits in maize. BMC Genomics, (2016) 17:946

21       Wang XL, Wang HW, Liu SX, Ferjani A, Li JS, Yan JB, Yang XH*, Qin F*. 2016 Genetic variation in ZmVPP1 contributes to drought tolerance in maize seedlings. Nat Genet, 48(10): 1233-1241

22       Xiao YN, Thatcher S, Wang M, Wang TT, Beatty M, Zastrow-Hayes G, Li L, Li JS, Li BL, Yang XH*. 2016 Transcriptome analysis of near-isogenic lines provides molecular insights into starch biosynthesis in maize kernel. J Integr Plant Bio, 58(8): 713-723

23       Xu J, Li ZG, Yang HR, Yang XH, Chen CX, Li Hui. 2016 Genetic diversity and molecular evolution of a violaxanthin de-epoxidase gene in maize. Front in Genet, 7:1-11

24       Pan QC, Li L, Yang XH, Tong H, Xu ST, Li ZG, Li WY, Muehlbauer GJ, Li JS, Yan JB. 2015 Genome-wide recombination dynamics are associated with phenotypic variation in maize. New Phytol, 210(3):1083-1094

25       Xiao YJ, Tong H, Yang XH, Xu SZ, Pan QC, Qiao F, Raihan MS, Luo Y, Liu HJ, Zhang XH, Yang N, Wang XQ, Deng M, Jin ML, Zhao LJ, Luo X, Zhou Y, Li X, Liu J, Zhan W, Liu NN, Wang H, Chen GS, Cai Y, Xu G, Wang WD, Zheng DB, Yan JB. 2016 Genome-wide dissection of the maize ear genetic architecture using multiple populations. New Phytol, 210 (3): 1095-1106

26       Jittham O, Fu XY, Xu Ji, Chander S, Li JS, Yang XH*. 2016 Genetic dissection of carotenoids in maize kernels using high-density single nucleotide polymorphism markers in a recombinant inbred line population. The Crop Journal, 5(1): 63-72

27       陈琳，李建生，杨小红*. 2016 不同基因型玉米单倍体雄穗自然加倍研究. 中国农业大学学报, 1(6): 1-8

28       陈琳，李建生，杨小红*. 2016玉米单倍体花药外露、花药大小与花粉育性的相关性研究. 中国农业大学学报, 1(5):17-21

 

29       Wang TT, Wang M, Hu ST, Xiao YN, Tong H, Pan QC, Xue JQ, Yan JB, Li JS, Yang XH*. 2015 Genetic basis of maize kernel starch content revealed by high-density single nucleotide polymorphism markers in a recombinant inbred line population. BMC Plant Biol, 15:288

30       Mao HD, Wang HW, Liu SX, Li ZG, Yang XH, Yan JB, Li JS, Tran LP, Qin F. 2015 A transposable element in a NAC gene is associated with drought tolerance in maize seedlings. Nat Commun, 6:8326

31       Liu HJ, Wang XQ, Warburtonb MY, Wen WW, Jin ML, Deng M, Liu J, Tong H, Pan QC, Yang XH, Yan JB. 2015 Genomic, transcriptomic and phenomic variation reveals the complex adaptation of modern maize breeding. Mol Plant, 8(6):871-84

32       Xing AQ, Gao YF, Ye LF, Zhang WP, Cai LC, Ching A, Llaca V, Johnson B, Liu L, Yang XH, Kang DM, Yan JB, Li JS. 2015 A rare SNP mutation in Brachytic2 moderately reduces plant height and increases yield potential in maize. J Exp Bot, 66(13):3791-802

 

33       Cai LC, Li K, Yang XH*, Li JS*. 2014 Identification of lager-effect QTL for kernel row number has potential for maize yield improvement. Mol Breeding, 34:1087-1096

34       Hao XM, Li XW, Yang XH*, Li JS*. 2014 Transferring a major QTL for oil content using marker-assisted backcrossing into an elite hybrid to increase the oil content in maize. Mol Breeding, 34:739–748

35       Li K, Yan JB, Li JS*, Yang XH*. 2014 Genetic architecture of rind penetrometer resistance in two maize recombinant inbred line populations. BMC Plant Biol, 14:152

36       Guo TT, Yang N, Tong H, Pan QC, Yang XH, Tang JH, Wang JK, Li JS, Yan JB. 2014 Genetic basis of grain yield heterosis in an “immortalized F2” maize population. Theor Appl Genet,  127:2149–2158

37       Liu HH, Liu HQ, Wei L, Yang XH, Lin ZW. 2014 A transposable element insertion disturbed starch synthase gene SSIIb in maize. Mol Breeding, 34:1159–1171

38       Yang N, Lu YL, Yang XH, Huang J, Zhou Y, Ali F, Wen WW, Liu J, Li JS, Yan JB. 2014 Genome wide association studies using a new nonparametric model reveal the genetic architecture of 17 agronomic traits in an enlarged maize association panel. PLoS Genet, 10(9): e1004573

 

39       Li H#, Peng ZY#, Yang XH#, Wang WD#, Fu JJ#, Wang JH#, Han YJ, Chai YC, Guo TT, Yang N, Liu J, Warburton ML, Cheng YB, Hao XM, Zhang P, Zhao JY, Liu YJ, Wang GY, Li JS, Yan JB. 2013 Genome-wide association study dissects the genetic architecture of oil biosynthesis in maize kernels. Nat Genet, 45: 43-50

40       Yang Q, Li Z, Li WQ, Ku LX, Wang C, Ye JR, Li K, Yang N, Li YP, Zhong T, Li JS, Chen YH*, Yan JB*, Yang XH*, Xu ML*. 2013 CACTA-like transposable element in ZmCCT attenuated photoperiod sensitivity and accelerated the postdomestication spread of maize. PNAS, 110: 16969-16974

41       Fu JJ#, Cheng YB#, Linghu JJ#, Yang XH#, Kang L#, Zhang ZX#, Zhang J, He C, Du XM, Peng ZY, Wang B, Zhai LH, Dai CM, Xu JB, Wang WD, Li XR, Zheng J, Chen L, Luo LH, Liu JJ, Qian XJ, Yan JB, Wang J, Wang GY. 2013 RNA sequencing reveals the complex regulatory network in maize kernel. Nat Commun, 4:2832

42       Liu SX, Wang XL, Wang HG, Xin HB, Yang XH, Yan JB, Li JS, Tran LP, Shinozaki K, Yamaguchi-Shinozaki K, Qin F. 2013 Genome-wide analysis of ZmDREB Genes and their association with natural variation in drought tolerance at seedling stage of Zea mays L. PLoS Genet, 9(9): e1003790

43       Fu ZY, Chai YC, Zhou Y, Yang XH, Warburton ML, Xu ST, Cai Y, Zhang DL, Li JS, Yan JB. 2013 Natural variation in the sequence of PSY1 and frequency of favorable polymorphisms among tropical and temperate maize germplasm. Theor Appl Genet, 126(4):923-35

44       Guo YQ, Yang XH, Chander S, Yan JB, Zhang J, Song TM, Li JS. 2013 Identification of unconditional and conditional QTL for oil, protein and starch content in maize. Crop J, 1: 34-42

45       郑德波，杨小红，李建生，严建兵，张士龙，贺正华，黄毅勤. 2013 基于SNP标记的玉米株高及穗位高QTL定位. 作物学报, 3: 549-556

 

46       Pan QC, Ali F, Yang XH, Li JS, Yan JB. 2012 Exploring the genetic characteristics of two recombinant inbred line populations via high-density SNP markers in maize. PLoS One, 7: e52777

47       Li Q#, Yang XH#, Xu ST#, Cai Y, Zhang DL, Han YJ, Li L, Zhang ZX, Gao SB, Li JS, Yan JB. 2012 Genome-wide association studies identified three independent polymorphisms associated with α-tocopherol content in maize kernels. PLoS One, 7: e36807

48       Yang XH#, Ma HL#, Zhang P, Yan JB, Guo YQ, Song TM, Li JS. 2012 Characterization of QTL for oil content in maize kernel. Theor Appl Genet, 125(6): 1169-1179

49       Zhou Y, Han YJ, Li ZG, Fu Y, Fu ZY, Xu ST, Li JS, Yan JB, Yang XH*. 2012 ZmcrtRB3 encoding a carotenoid hydroxylase that affects the accumulation of α-carotene in maize kernel. J Integr Plant Bio, 54 (4): 260–269

50       Chai YC, Hao XM, Yang XH, Allen WB, Li JM, Yan JB, Shen B, Li JS. 2012 Validation of DGAT1-2 polymorphisms associated with oil content and development of functional markers for molecular breeding of high-oil maize. Mol Breeding, 29: 939-949

51       Zhang P, Allen WB, Nagasawa N, Ching AS, Heppard EP, Li H, Hao XM, Li XW, Yang XH, Yan JB, Nagato Y, Sakai H, Shen B, Li JS. 2012 A transposable element insertion within ZmGE2 gene is associated with increase in embryo to endosperm ratio in maize. Theor Appl Genet, 125(7): 1463-1471

52       Xu ST, Zhang DL, Cai Y, Zhou Y, Shah T, Farthan A, Li Q, Li ZG, Wang WD, Li JS, Yang XH, Yan JB. 2012 Dissecting tocopherols content in maize (Zea mays L.), using two segregating populations and high-density single nucleotide polymorphism markers. BMC Plant Biol, 12: 201

53       高玉峰, 任元, 张卫平, 张攀, 严建兵, 李建生, 杨小红^#. 2012玉米产量构成因子染色体代换系的构建及初步评价. 玉米科学, 20(1): 35-38

54       惠国强, 杜何为, 杨小红, 刘光辉, 王振通, 张义荣, 郑艳萍, 严建兵, 李建生. 2012不同除草剂加倍玉米单倍体的效率. 作物学报, 38: 416-422

 

55       Yang XH, Gao SB, Xu ST, Zhang ZX, Prasanna BM, Li L, Li JS, Yan JB. 2011 Characterization of a global germplasm collection and its potential utilization for analysis of complex quantitative traits in maize. Mol Breeding, 28:511-526

56       Yang XH, Xu YB, Shah T, Li HH, Han ZH, Li JS, Yan JB. 2011 Comparison of SSRs and SNPs in assessment of genetic relatedness in maize. Genetica, 139:1045-1054

57       Li L, Li H, Li Q, Yang XH, Zheng DB, Warburton M, Chai YC, Zhang P, Guo YQ, Yan JB , Li JS. 2011 An 11-bp insertion in Zea mays fatb reduces the palmitic acid content of fatty acids in maize grain. PLoS One, 6: e24699

58       Du HW, Yang XH, Yan JB, Li JS. Fatty acid elongase 1 (FAE1) promoter as a candidate for genetic engineering of fatty acids to improve seed oil composition. African Journal of Biotechnology, 2011 10:19615-19622

59       高玉峰, 张攀, 郝晓敏, 严建兵, 李建生, 杨小红^#. 2011一种快速提取玉米大群体基因组DNA的方法. 中国农业大学学报, 16(6): 32-36

 

60       Yang XH, Guo YQ, Yan JB, Zhang J, Song TM, Rocheford T, Li JS. 2010 Major and minor QTL and epistasis contribute to fatty acid compositions and oil concentration in high-oil maize. Theor Appl Genet, 120: 665-678

61       Yang XH, Yan JB, Shah T, Warburton ML, Li Q, Li L, Gao YF, Chai YC, Fu ZY, Zhou Y, Xu ST, Bai GH, Meng YJ, Zheng YP, Li JS. 2010 Genetic analysis and characterization of a new maize association mapping panel for quantitative trait loci dissection. Theor Appl Genet, 121:417-431

62       Yan JB, Kandianis CB, Harjes CE, Bai L, Kim E, Yang XH, Skinner D, Fu ZY, Mitchell S, Li Q, Fernandez M GS, Zaharieva M, Babu R, Fu Y, Palacios N, Li JS, DellaPenna D, Brutnell T, Buckler ES, Warburton ML, Rocheford T. 2010 Rare genetic variation at zea mays crtrb1 increases β-carotene in maize grain. Nat Genet, 42: 322-327

63       Li Q, Li L, Yang XH, Warburton ML, Bai GH, Dai JR, Li LS, Yan JB. 2010 Relationship, evolutionary fate and function of two maize orthologous genes of rice GW2 associated with kernel size and weight. BMC Plant Bio, 10:143

64       Li Q, Yang XH, Bai GH, Warburton ML, Mahuku G, Gore M, Dai JR, Li JS, Yan JB. 2010 Cloning and characterization of a putative GS3 ortholog involved in maize kernel development. Theor Appl Genet, 120:753-763

65       Yan JB, Yang XH, Shah T, Sánchez-Villeda H, Li JS, Warburton ML, Zhou Y, Crouch JH, Xu YB. 2010 High-throughput SNP genotyping with the GoldenGate assay in maize. Mol Breeding, 25:441-451

66       Li L, Li H, Li JY, Xu ST, Yang XH, Li JS, Yan JB. 2010 A genome-wide survey of maize lipid-related genes: candidate genes mining, digital gene expression profiling and co-location with QTL for maize kernel oil. China Science Life Science, 53: 690-700

67       白光红, 杨小红, 李林, 任元, 高玉峰, 章建新, 严建兵, 李建生. 2010玉米子粒体积和比重的QTL分析. 玉米科学, 18(5): 19-22

 

68       Liu ZJ, Yang XH, Fu Y, Zhang YR, Yan JB, Song TM, Rocheford TR, Li JS. 2009 Proteomic analysis of early germs with high-oil and normal inbred lines in maize. Mol Biol Rep, 36:813-821

69       Liu ZJ, Yang XH, Fu Y. 2009 SAD, a stearoyl-acyl carrier protein desaturase, highly expressed in high-oil maize inbred lines. Russ J Plant Physiol, 56: 709-715

70       Yang XH, Guo YQ, Fu Y, Hu JY, Chai YC, Zhang YR, Li JS. 2009 Measuring fatty acid concentration in maize grain by near-infrared reflectance spectroscopy. Spectroscopy and Spectral Analysis, 29: 106-109

71       马海林, 杨小红, 郭玉秋, 李林, 白光红, 李建生. 2009玉米子粒与油分性状相关分析研究. 作物杂志, 1:23-25

72       周 毅, 付志远, 李 青, 徐淑兔, Chander S, 杨小红, 李建生, 严建兵. 2009 高油和普通玉米自交系类胡萝卜素和生育酚含量的比较分析. 作物学报, 35(11): 2073-2084

 

73       Chander S, Guo YQ, Yang XH, Zhang J, Lu XQ, Yan JB, Song TM, Rocheford TR, Li JS. 2008 Using molecular markers to identify two major loci controlling carotenoid contents in maize grain. Theor Appl Genet, 116: 223-233

74       Chander S, Guo YQ, Yang XH, Yan JB, Zhang YR, Song TM and Li JS. 2008 Genetic dissection of tocopherol content and composition in maize grain using quantitative trait loci analysis and the candidate gene approach. Mol Breeding, 22: 353-365

 

75       杨小红, 严建兵, 郑艳萍, 余建明, 李建生. 2007植物数量状关联分析研究进展. 作物学报, 33(4): 523-530